Jatropha Genome Database

JcCB0186021.10 (JcS_101049.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0186021
Scaffold:
JcS_101049 JcCB0136401(-) =JcCB0623681(-) =JcCB0186021(-) =JcCB0104661(+) =JcCA0275691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl C9E1T5_9ROSI 174 100.0 100.0 (tr|C9E1T5) 40S ribosomal protein S-21e, putative OS=Jatropha curcas PE=4 SV=1
Arabidopsis_pep AT5G27700.1 150 86.4 92.6 | Symbols: | structural constituent of ribosome | chr5:9807541-9808048 REVERSE
soybean_pep Glyma15g15800.1 148 81.7 91.5  
Medicago_pep IMGA|Medtr7g084190.1 142 77.8 88.9 Ribosomal protein S21e chr07_pseudomolecule_IMGAG_V3 18143983-18145438 E EGN_Mt090430 20090702
grape_pep GSVIVT01031151001 162 91.5 95.1  
castor_bean_cds 30128.m008820 278 89.1 89.1 40S ribosomal protein S21e, putative
castor_bean_pep 30128.m008820 168 96.3 98.8 40S ribosomal protein S21e, putative
JAT_13201ests gi|218687214|gb|GH295701.1|GH295701 494 100.0 100.0 JCL150 Jatropha curcas total leaf library Jatropha curcas cDNA, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0186021.10 length: 82 aa.
IPR001931 Ribosomal protein S21e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD006584 Ribosomal_S21e 0.0 26-74
HMMPIR PIRSF002148 Ribosomal_S21e 2.3000044072653394E-47 1-82
HMMPanther PTHR10442 Ribosomal_S21E 1.1000015067164284E-42 2-82
HMMPfam PF01249 Ribosomal_S21e 1.4000000000000064E-36 1-77
IPR018279 Ribosomal protein S21e, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00996 RIBOSOMAL_S21E 0.0 11-19