Jatropha Genome Database

JcCB0183721.10 (JcS_101967.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0183721
Scaffold:
JcS_101967 JcCB0115461(-) =JcCA0297121(-) =JcCB0341321(+) =JcCB0183721(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9STA6_RICCO 525 78.7 84.8 (tr|B9STA6) Cysteine protease ATG4B, putative OS=Ricinus communis GN=RCOM_0365260 PE=4 SV=1
Arabidopsis_pep AT2G44140.1 382 57.4 72.8 | Symbols: | autophagy 4a (APG4a) | chr2:18255106-18257165 REVERSE
soybean_pep Glyma18g48380.1 428 64.5 75.5  
Medicago_pep IMGA|Medtr7g092800.1 427 64.0 76.1 Peptidase C54 chr07_pseudomolecule_IMGAG_V3 20520504-20516975 E EGN_Mt090430 20090702
grape_pep GSVIVT01003913001 466 68.6 78.9  
castor_bean_cds 28966.m000547 624 87.2 87.2 Cysteine protease ATG4B, putative
castor_bean_pep 28966.m000547 525 78.7 84.8 Cysteine protease ATG4B, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09444 797 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0183721.10 length: 310 aa.
IPR005078 Peptidase C54
method AccNumber shortName E-value location
HMMPanther PTHR22624 APG4 7.8e-135 93-309
HMMPfam PF03416 Peptidase_C54 4.6e-67 92-309
no_ID  
HMMPanther PTHR22624:SF7 AUTOPHAGY 7.8e-135 93-309
Seg seg seg NA 249-258