| JcS_103117 | JcCA0020001(+) =JcCB0086771(+) =JcCB0183081(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RXQ1_RICCO | 478 | 85.3 | 88.6 | (tr|B9RXQ1) Homeobox protein, putative OS=Ricinus communis GN=RCOM_0905400 PE=3 SV=1 |
| Arabidopsis_pep | AT4G04890.1 | 402 | 73.6 | 83.0 | | Symbols: PDF2 | PDF2 (PROTODERMAL FACTOR 2); DNA binding / transcription factor | chr4:2476970-2480090 REVERSE |
| soybean_pep | Glyma01g45070.1 | 408 | 74.5 | 82.1 | |
| Medicago_pep | IMGA|Medtr2g103900.2 | 346 | 66.7 | 77.3 | Lipid-binding START; Homeodomain-related chr02_pseudomolecule_IMGAG_V3 24364224-24370618 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01012643001 | 437 | 77.1 | 85.6 | |
| castor_bean_cds | 29842.m003633 | 688 | 86.2 | 86.2 | homeobox protein, putative |
| castor_bean_pep | 29842.m003633 | 478 | 85.3 | 88.6 | homeobox protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0183081.10 | length: 270 aa. | |||
| IPR000047 | Helix-turn-helix motif, lambda-like repressor | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| FPrintScan | PR00031 | HTHREPRESSR | 6.1e-05 | 87-96 96-112 |
| IPR001356 | Homeobox | |||
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| HMMPfam | PF00046 | Homeobox | 6.1e-18 | 59-114 |
| HMMSmart | SM00389 | no description | 1.8e-18 | 57-120 |
| ProfileScan | PS50071 | HOMEOBOX_2 | 16.827 | 56-116 |
| IPR002913 | Lipid-binding START | |||
| ProfileScan | PS50848 | START | 12.842 | 239-270 |
| IPR009057 | Homeodomain-like | |||
| superfamily | SSF46689 | Homeodomain-like | 2.4e-19 | 46-122 |
| IPR012287 | Homeodomain-related | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0045449 | regulation of transcription | ||
| Gene3D | G3DSA:1.10.10.60 | no description | 1.3e-15 | 51-121 |
| IPR017970 | Homeobox, conserved site | |||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0030528 | transcription regulator activity | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| PatternScan | PS00027 | HOMEOBOX_1 | NA | 91-114 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 110-146 |
| HMMPanther | PTHR19418 | HOMEOBOX | 6.2e-12 | 35-141 |
| Seg | seg | seg | NA | 192-208 |