Jatropha Genome Database

JcCB0182811.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0182811
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T1U3_RICCO 709 76.5 85.6 (tr|B9T1U3) Long-chain-fatty-acid CoA ligase, putative OS=Ricinus communis GN=RCOM_0691170 PE=4 SV=1
Arabidopsis_pep AT2G04350.2 587 66.1 78.4 | Symbols: | long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8) | chr2:1516086-1519178 FORWARD
soybean_pep Glyma20g07280.1 641 69.2 80.4  
Medicago_pep IMGA|Medtr3g106650.1 615 66.5 78.8 AMP-dependent synthetase and ligase chr03_pseudomolecule_IMGAG_V3 26904114-26897436 E EGN_Mt090430 20090702
grape_pep GSVIVT01030119001 630 70.5 82.7  
castor_bean_cds 29732.m000322 565 86.8 86.8 long-chain-fatty-acid CoA ligase, putative
castor_bean_pep 29732.m000322 709 76.5 85.6 long-chain-fatty-acid CoA ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09671 1253 98.7 98.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0182811.10 length: 465 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 4.1e-57 142-417
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 292-303
no_ID  
Gene3D G3DSA:3.40.50.980 no description 1.5e-33 146-309
HMMPanther PTHR11968 ATP-DEPENDENT 1.4e-127 79-465
HMMPanther PTHR11968:SF8 LONG-CHAIN-FATTY-ACID 1.4e-127 79-465
Seg seg seg NA 4-15
62-72
312-323
superfamily SSF56801 Acetyl-CoA 2e-57 54-465