Jatropha Genome Database

JcCB0171941.10 (JcS_108688.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0171941
Scaffold:
JcS_108688 JcCB0171941(-) =JcCB0535351(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RID7_RICCO 372 78.0 84.1 (tr|B9RID7) DNA-damage-inducible protein f, putative OS=Ricinus communis GN=RCOM_1578220 PE=4 SV=1
Arabidopsis_pep AT1G51340.2 269 60.3 70.6 | Symbols: | MATE efflux family protein | chr1:19032021-19034681 FORWARD
soybean_pep Glyma13g41460.1 313 65.8 74.1  
Medicago_pep IMGA|Medtr2g117440.1 270 59.0 69.3 Ribosomal protein S2; Multi antimicrobial extrusion protein MatE chr02_pseudomolecule_IMGAG_V3 27589576-27585050 F EGN_Mt090430 20090702
grape_pep GSVIVT01025266001 311 69.1 76.0  
castor_bean_cds 30169.m006452 634 86.8 86.8 DNA-damage-inducible protein f, putative
castor_bean_pep 30169.m006452 372 78.0 84.1 DNA-damage-inducible protein f, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0171941.10 length: 268 aa.
IPR002528 Multi antimicrobial extrusion protein MatE
method AccNumber shortName E-value location
Biological Process GO:0006855 multidrug transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPanther PTHR11206 MULTIDRUG 4.8e-53 59-246
HMMPfam PF01554 MatE 5.8e-10 167-259
no_ID  
HMMPanther PTHR11206:SF3 DNA-DAMAGE-INDUCIBLE 4.8e-53 59-246
Seg seg seg NA 39-57