Jatropha Genome Database

JcCB0171551.10 (JcS_100179.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0171551
Scaffold:
JcS_100179 JcCB0060211(+) =JcCB0171551(+) =JcCD0159961(+) =JcCA0298381(+) =JcPR02JKLVA(-) =JcCB0273241(+) =JcPR04GRZMU(+) =JcCB0057251(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RS47_RICCO 677 93.4 95.7 (tr|B9RS47) Aspartate aminotransferase OS=Ricinus communis GN=RCOM_0802970 PE=3 SV=1
Arabidopsis_pep AT5G11520.1 635 85.1 93.7 | Symbols: ASP3, YLS4 | ASP3 (ASPARTATE AMINOTRANSFERASE 3); L-aspartate:2-oxoglutarate aminotransferase | chr5:3685257-3687721 REVERSE
soybean_pep Glyma06g08670.1 633 86.6 93.7  
Medicago_pep IMGA|Medtr4g110030.1 357 51.2 69.4 Aspartate/other aminotransferase; ; chr04_pseudomolecule_IMGAG_V3 24784975-24779539 E EGN_Mt090430 20090702
grape_pep GSVIVT01035662001 641 88.3 93.2  
castor_bean_cds 29794.m003446 1126 88.8 88.8 aspartate aminotransferase, putative
castor_bean_pep 29794.m003446 677 93.4 95.7 aspartate aminotransferase, putative
JAT_13201ests gi|237680306|gb|GO246518.1|GO246518 274 98.1 98.1 JcrME_RL0062 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c01596 2070 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0171551.10 length: 392 aa.
IPR000796 Aspartate/other aminotransferase
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0008483 transaminase activity    
FPrintScan PR00799 TRANSAMINASE 9.9e-47 194-213
225-239
261-281
293-318
HMMPanther PTHR11879 ASPARTATE 5.3e-212 16-355
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 263-276
IPR004839 Aminotransferase, class I/II
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 7.8e-85 46-366
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 9.7e-111 63-335
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 6.1e-100 16-358