Jatropha Genome Database

JcCB0171281.10 (JcS_102825.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0171281
Scaffold:
JcS_102825 JcCD0062613(+) =JcCB0171281(-) =JcCB0652651(+) =JcCB0368291(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H5C4_POPTR 139 82.7 90.1 (tr|B9H5C4) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_715555 PE=4 SV=1
Arabidopsis_pep AT5G42210.1 95.5 71.6 79.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tetracycline transporter (TAIR:AT2G16990.2); Has 985 Blast hits to 984 proteins in 348 species: Archae - 2; Bacteria - 541; Metazoa - 251; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). | chr5:16867865-16870568 FORWARD
soybean_pep Glyma06g02320.1 111 75.4 91.3  
Medicago_pep IMGA|Medtr3g157380.1 102 68.1 87.0 Major facilitator superfamily MFS_1 chr03_pseudomolecule_IMGAG_V3 41481094-41483595 E EGN_Mt090430 20090702
grape_pep GSVIVT01008736001 117 68.7 83.1  
castor_bean_cds 30170.m014289 161 85.9 85.9 tetracycline transporter, putative
castor_bean_pep 30170.m014289 130 79.0 88.9 tetracycline transporter, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0171281.10 length: 109 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR10074 MAJOR 3.6e-27 29-81
HMMPanther PTHR10074:SF15 TETRACYCLINE 3.6e-27 29-81