Jatropha Genome Database

JcCB0167931.10 (JcS_100289.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0167931
Scaffold:
JcS_100289 JcCB0304051(+) =JcCB0463411(+) =JcCB0280981(-) =JcCB0167931(+) =JcCD0160234(-) =JcCB0365841(+) =JcCB0269831(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RP67_RICCO 884 93.6 95.1 (tr|B9RP67) Cellulose synthase A catalytic subunit 6 [UDP-forming], putative OS=Ricinus communis GN=RCOM_0924530 PE=4 SV=1
Arabidopsis_pep AT4G32410.1 822 87.0 91.6 | Symbols: CESA1, RSW1 | CESA1 (CELLULOSE SYNTHASE 1); cellulose synthase/ transferase, transferring glycosyl groups | chr4:15641009-15646388 REVERSE
soybean_pep Glyma06g07320.2 856 90.9 93.8  
Medicago_pep IMGA|Medtr3g136720.1 824 86.8 91.7 Zinc finger, RING-type; Cellulose synthase chr03_pseudomolecule_IMGAG_V3 34568485-34575037 E EGN_Mt090430 20090702
grape_pep GSVIVT01035830001 863 90.9 94.2  
castor_bean_cds 29848.m004649 1812 91.8 91.8 Cellulose synthase A catalytic subunit 6 [UDP-forming], putative
castor_bean_pep 29848.m004649 884 93.6 95.1 Cellulose synthase A catalytic subunit 6 [UDP-forming], putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03660 1778 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0167931.10 length: 470 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 321-342
HMMPanther PTHR13301 X-BOX 3.9e-12 19-60
HMMPanther PTHR13301:SF1 TGACG-MOTIF-BINDING 3.9e-12 19-60
HMMPfam PF03552 Cellulose_synt 1.6e-154 223-470
Seg seg seg NA 144-154