Jatropha Genome Database

JcCB0164571.10 (JcS_100049.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0164571
Scaffold:
JcS_100049 JcCA0116171(-) =JcCB0083791(+) =JcCB0601571(+) =JcCB0964531(-) =JcCB0033901(-) =JcCB0164571(-) =JcCB0240501(+) =JcPR03DXLSD(-) =JcCA0154191(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SKH9_RICCO 536 83.2 91.6 (tr|B9SKH9) Nucleolar GTP-binding protein, putative OS=Ricinus communis GN=RCOM_0658890 PE=4 SV=1
Arabidopsis_pep AT1G80770.1 447 68.8 85.7 | Symbols: PDE318 | PDE318 (pigment defective 318); GTP binding | chr1:30355266-30357786 FORWARD
soybean_pep Glyma08g45370.1 292 77.3 90.9  
Medicago_pep IMGA|Medtr8g021130.1 126 28.9 52.2 Nucleolar GTP-binding 1; NOG, C-terminal chr08_pseudomolecule_IMGAG_V3 3811895-3813941 E EGN_Mt090430 20090702
grape_pep GSVIVT01022468001 498 75.5 88.1  
castor_bean_cds 29709.m001212 839 86.9 86.9 nucleolar GTP-binding protein, putative
castor_bean_pep 29709.m001212 536 83.2 91.6 nucleolar GTP-binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0164571.10 length: 341 aa.
IPR006073 GTP1/OBG
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00326 GTP1OBG 2.9e-11 149-169
170-188
197-212
IPR010674 Nucleolar GTP-binding 1
Molecular Function GO:0005525 GTP binding    
HMMPfam PF06858 NOG1 3.2e-20 213-270
no_ID  
Coil coil coiled-coil NA 101-122
Gene3D G3DSA:3.40.50.300 no description 2.5e-23 146-324
HMMPanther PTHR11702 DEVELOPMENTALLY 9.4e-76 34-273
HMMPanther PTHR11702:SF4 NUCLEOLAR 9.4e-76 34-273
Seg seg seg NA 1-9
superfamily SSF52540 P-loop 4.4e-29 115-331