Jatropha Genome Database

JcCB0164521.20 (JcS_108652.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0164521
Scaffold:
JcS_108652 JcCB0164521(-) =JcCA0295771(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SPJ0_RICCO 542 58.5 71.8 (tr|B9SPJ0) Disease resistance protein RPM1, putative OS=Ricinus communis GN=RCOM_0024370 PE=4 SV=1
Arabidopsis_pep AT3G07040.1 122 24.7 44.4 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE
soybean_pep Glyma09g34380.1 154 28.3 46.9  
Medicago_pep IMGA|Medtr5g028060.1 156 27.8 46.0 NB-ARC chr05_pseudomolecule_IMGAG_V3 11516153-11519924 E EGN_Mt090430 20090702
grape_pep GSVIVT01032422001 284 49.4 63.2  
castor_bean_cds 27504.m000624 321 83.8 83.8 Disease resistance protein RPM1, putative
castor_bean_pep 27504.m000624 542 58.5 71.8 Disease resistance protein RPM1, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06953 109 82.1 82.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0164521.20 length: 537 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 1.6e-05 175-339
353-486
HMMPanther PTHR23155 LEUCINE-RICH 4.2e-08 179-280
HMMPanther PTHR23155:SF37 LEUCINE-RICH 4.2e-08 179-280
Seg seg seg NA 19-23
359-373
superfamily SSF52058 L 2.8e-31 180-537