Jatropha Genome Database

JcCB0161621.10 (JcS_100390.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0161621
Scaffold:
JcS_100390 JcCA0103791(-) =JcCA0275671(+) =JcCB0027171(+) =JcCB0056061(-) =JcCB0161621(-) =JcCB0116941(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5AP72_VITVI 231 100.0 100.0 (tr|A5AP72) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026639 PE=3 SV=1
Arabidopsis_pep AT1G75840.1 226 97.2 99.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase | chr1:28475964-28477377 FORWARD
soybean_pep Glyma04g02530.1 228 97.2 100.0  
Medicago_pep IMGA|Medtr8g089410.1 225 95.4 100.0 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19209541-19213679 F EGN_Mt090430 20090702
grape_pep GSVIVT01024029001 231 100.0 100.0  
castor_bean_cds 29602.m000209 446 92.3 92.3 rac gtpase, putative
castor_bean_pep 29602.m000209 230 99.1 99.1 rac gtpase, putative
JAT_13201ests gi|268516974|gb|FM892526.1|FM892526 646 100.0 100.0 FM892526 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095, mRNA sequence
KJC_r1 KJC_c00209 650 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0161621.10 length: 182 aa.
IPR001806 Ras GTPase
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 3.5e-15 36-52
53-75
115-128
IPR003577 Ras small GTPase, Ras type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00173 no description 5.5e-06 7-175
IPR003578 Small GTPase, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 no description 2.6e-44 33-174
ProfileScan PS51420 RHO 16.111 1-182
IPR003579 Ras small GTPase, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 no description 1.3e-08 32-175
IPR005225 Small GTP-binding protein
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 7.4e-18 10-162
IPR013753 Ras
HMMPfam PF00071 Ras 1.9e-30 32-133
no_ID  
Gene3D G3DSA:3.40.50.300 no description 5.1e-29 26-180
HMMPanther PTHR11708 RAS-RELATED 5.6e-87 40-136
HMMPanther PTHR11708:SF285RAS-RELATED PROTEIN 5.6e-87 40-136
Seg seg seg NA 150-164
superfamily SSF52540 P-loop 1.5e-28 26-177