Jatropha Genome Database

JcCB0156631.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0156631
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A9PL95_POPTR 194 61.7 65.4 (tr|A9PL95) AP2/ERF domain-containing transcription factor OS=Populus trichocarpa GN=RAP2L5 PE=4 SV=1
Arabidopsis_pep AT5G67190.1 166 56.0 62.5 | Symbols: | AP2 domain-containing transcription factor, putative | chr5:26809135-26809689 REVERSE
soybean_pep Glyma17g18580.1 170 58.8 64.2  
Medicago_pep IMGA|Medtr5g016640.1 181 59.0 65.3 Pathogenesis-related transcriptional factor and ERF chr05_pseudomolecule_IMGAG_V3 5888285-5889346 E EGN_Mt090430 20090702
grape_pep GSVIVT01022076001 172 58.7 63.5  
castor_bean_cds 28718.m000038 182 88.7 88.7 DNA binding protein, putative
castor_bean_pep 30170.m013843 159 54.7 62.7 Dehydration-responsive element-binding protein 1B, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09483 509 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0156631.10 length: 185 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 3.9e-11 22-33
60-80
Gene3D G3DSA:3.30.730.10 no description 3.1e-22 20-81
HMMPfam PF00847 AP2 2.9e-14 22-70
HMMSmart SM00380 no description 1.8e-36 21-84
ProfileScan PS51032 AP2_ERF 22.036 21-78
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 5.9e-22 20-81
no_ID  
Seg seg seg NA 7-15
114-151