Jatropha Genome Database

JcCB0154921.10 (JcS_102611.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0154921
Scaffold:
JcS_102611 JcCB0754221(-) =JcCB0154921(-) =JcCB0190761(+) =JcCB0103271(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SNR1_RICCO 379 58.0 66.4 (tr|B9SNR1) Transcription factor, putative OS=Ricinus communis GN=RCOM_1026740 PE=4 SV=1
Arabidopsis_pep AT3G02150.2 139 87.1 97.1 | Symbols: PTF1, TFPD | PTF1 (PLASTID TRANSCRIPTION FACTOR 1); transcription factor | chr3:391522-392589 FORWARD
soybean_pep Glyma19g03810.1 167 60.8 70.6  
Medicago_pep IMGA|Medtr3g036490.1 139 36.5 48.4 TCP transcription factor chr03_pseudomolecule_IMGAG_V3 9665599-9664445 H EGN_Mt090430 20090702
grape_pep GSVIVT01032911001 278 45.3 60.4  
castor_bean_cds 29905.m000443 303 88.6 88.6 transcription factor, putative
castor_bean_pep 29905.m000443 379 58.0 66.4 transcription factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0154921.10 length: 362 aa.
IPR005333 Transcription factor, TCP
method AccNumber shortName E-value location
HMMPfam PF03634 TCP 1.9e-30 56-194
IPR017887 Transcription factor TCP subgroup
ProfileScan PS51369 TCP 31.469 58-116
no_ID  
Seg seg seg NA 27-39
112-123
265-281