Jatropha Genome Database

JcCB0149161.10 (JcS_101351.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0149161
Scaffold:
JcS_101351 JcCB0071431(-) =JcCB0071491(-) =JcCB0633241(-) =JcCB0149161(+) =JcCB0335101(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RJX9_RICCO 231 78.6 84.4 (tr|B9RJX9) DNA binding protein, putative OS=Ricinus communis GN=RCOM_1039610 PE=4 SV=1
Arabidopsis_pep AT1G09710.1 128 51.0 64.7 | Symbols: | DNA binding | chr1:3141119-3144232 FORWARD
soybean_pep Glyma04g10190.1 118 41.5 59.1  
Medicago_pep IMGA|Medtr3g149540.1 108 44.9 63.5 Homeodomain-related; chr03_pseudomolecule_IMGAG_V3 39154744-39146673 E EGN_Mt090430 20090702
grape_pep GSVIVT01009184001 168 64.9 74.0  
castor_bean_cds 29908.m006268 353 81.6 81.6 DNA binding protein, putative
castor_bean_pep 29908.m006268 231 78.6 84.4 DNA binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c08550 791 96.0 96.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0149161.10 length: 221 aa.
IPR009057 Homeodomain-like
method AccNumber shortName E-value location
superfamily SSF46689 Homeodomain-like 1.3e-06 172-219
IPR012287 Homeodomain-related
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0045449 regulation of transcription    
Gene3D G3DSA:1.10.10.60 no description 7.6e-06 170-219
IPR014778 Myb, DNA-binding
HMMPfam PF00249 Myb_DNA-binding 1.3e-06 179-208
IPR015495 Myb transcription factor
HMMPanther PTHR10641 MYB-RELATED 1.8e-06 175-208
IPR017930 HTH transcriptional regulator, Myb-type, DNA-binding
ProfileScan PS51294 HTH_MYB 13.042 174-221