Jatropha Genome Database

JcCB0135871.10 (JcS_104870.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0135871
Scaffold:
JcS_104870 JcCB0045481(-) =JcCA0275371(-) =JcCB0135871(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5AHF5_VITVI 305 68.3 84.2 (tr|A5AHF5) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026270 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 107 34.2 52.8 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma11g04990.1 304 64.9 84.1  
Medicago_pep IMGA|Medtr4g080020.1 105 32.0 53.5 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01009548001 184 52.1 66.9  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0135871.10 length: 284 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 1.2e-07 1-53
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 5.4e-78 1-228