Jatropha Genome Database

JcCB0133991.20 (JcS_100509.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0133991
Scaffold:
JcS_100509 JcCB0133991(-) =JcCB0231181(+) =JcCA0143221(+) =JcCB0035141(+) =JcCA0154731(+) =JcCB0695751(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9R862_RICCO 469 79.9 84.9 (tr|B9R862) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1596990 PE=4 SV=1
Arabidopsis_pep AT5G39590.1 375 62.0 76.3 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); Has 144 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 9; Plants - 26; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | chr5:15851483-15853768 FORWARD
soybean_pep Glyma04g39340.1 398 68.3 80.8  
Medicago_pep IMGA|Medtr3g144020.1 384 69.2 83.1 TLDc chr03_pseudomolecule_IMGAG_V3 37259973-37262853 E EGN_Mt090430 20090702
grape_pep GSVIVT01009862001 428 77.5 86.6  
castor_bean_cds 30170.m014158 607 87.0 87.0 conserved hypothetical protein
castor_bean_pep 30170.m014158 469 79.9 84.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0133991.20 length: 277 aa.
IPR006571 TLDc
method AccNumber shortName E-value location
HMMSmart SM00584 no description 3.2e-37 34-221
no_ID  
HMMPanther PTHR23354 NUCLEOLAR 1.1e-05 59-277
HMMPfam PF07534 TLD 8.9e-23 59-221