Jatropha Genome Database

JcCB0129761.20 (JcS_101043.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0129761
Scaffold:
JcS_101043 JcCB0129761(-) =JcCA0276631(-) =JcCB0532351(+) =JcCB0375591(-) =JcCB0945271(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RR25_RICCO 413 60.5 70.3 (tr|B9RR25) Pectinesterase OS=Ricinus communis GN=RCOM_0708490 PE=3 SV=1
Arabidopsis_pep AT1G53840.1 233 42.0 58.0 | Symbols: ATPME1 | ATPME1; pectinesterase | chr1:20101533-20103458 FORWARD
soybean_pep Glyma07g05140.1 243 39.2 57.8  
Medicago_pep IMGA|Medtr8g026630.1 195 38.8 58.2 Pectinesterase; Pectinesterase inhibitor chr08_pseudomolecule_IMGAG_V3 5778584-5774889 E EGN_Mt090430 20090702
grape_pep GSVIVT01027356001 166 38.2 53.4  
castor_bean_cds 29739.m003677 157 82.3 82.3 Pectinesterase-1 precursor, putative
castor_bean_pep 29739.m003677 413 60.5 70.3 Pectinesterase-1 precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0129761.20 length: 395 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.2e-06 259-340
342-380
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 6.1e-12 53-223
HMMPfam PF04043 PMEI 2.3e-28 55-212
HMMSmart SM00856 no description 7.8e-34 55-212
HMMTigr TIGR01614 PME_inhib: 4e-15 21-217
superfamily SSF101148 Plant 1.3e-18 56-217
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1.4e-08 252-340
342-395
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 2e-07 252-340
341-395
no_ID  
Seg seg seg NA 44-59
74-85