Jatropha Genome Database

JcCB0129761.10 (JcS_101043.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0129761
Scaffold:
JcS_101043 JcCB0129761(-) =JcCA0276631(-) =JcCB0532351(+) =JcCB0375591(-) =JcCB0945271(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7TC98_VITVI 303 65.7 69.6 (tr|D7TC98) Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015019001 PE=4 SV=1
Arabidopsis_pep AT3G10720.2 254 55.8 68.4 | Symbols: | pectinesterase, putative | chr3:3354639-3357581 REVERSE
soybean_pep Glyma02g02000.1 270 55.2 71.7  
Medicago_pep IMGA|Medtr3g124040.1 258 54.6 68.1 Pectinesterase; Pectinesterase inhibitor chr03_pseudomolecule_IMGAG_V3 31343228-31339043 E EGN_Mt090430 20090702
grape_pep GSVIVT01015019001 303 65.7 69.6  
castor_bean_cds 29739.m003677 52.0 90.5 90.5 Pectinesterase-1 precursor, putative
castor_bean_pep 30147.m014208 268 56.3 68.8 Pectinesterase-2 precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0129761.10 length: 230 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.2e-93 1-213
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1e-67 1-230
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 6.9e-79 1-230
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 61-70