Jatropha Genome Database

JcCB0128761.10 (JcS_101353.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0128761
Scaffold:
JcS_101353 JcCB0728941(+) =JcCB0128761(-) =JcCA0151951(+) =JcCA0004811(-) =JcCB0340251(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RLV6_RICCO 275 90.2 92.8 (tr|B9RLV6) Sensory transduction histidine kinase, putative OS=Ricinus communis GN=RCOM_1471230 PE=4 SV=1
Arabidopsis_pep AT5G61380.1 254 83.1 91.5 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator | chr5:24675540-24678176 FORWARD
soybean_pep Glyma04g33110.1 262 83.0 90.2  
Medicago_pep IMGA|Medtr4g079920.1 119 46.0 61.3 Response regulator receiver; CCT chr04_pseudomolecule_IMGAG_V3 16245711-16238402 E EGN_Mt090430 20090702
grape_pep GSVIVT01007965001 244 88.0 93.2  
castor_bean_cds 30138.m004044 511 91.2 91.2 sensory transduction histidine kinase, putative
castor_bean_pep 30138.m004044 275 90.2 92.8 sensory transduction histidine kinase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04264 335 99.4 99.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0128761.10 length: 187 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 two-component response regulator activity    
Biological Process GO:0000160 two-component signal transduction system (phosphorelay)    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.1e-18 29-140
HMMSmart SM00448 no description 6.1e-19 27-142
ProfileScan PS50110 RESPONSE_REGULATORY 26.507 28-146
IPR011006 CheY-like
superfamily SSF52172 CheY-like 3.5e-26 24-153
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 3.5e-22 16-156
HMMPanther PTHR23283 SENSOR 2.8e-13 23-151
HMMPanther PTHR23283:SF47 SENSORY 2.8e-13 23-151
Seg seg seg NA 154-166