Jatropha Genome Database

JcCB0126561.10 (JcS_101039.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0126561
Scaffold:
JcS_101039 JcCB0126561(+) =JcCA0281391(-) =JcCB0287791(-) =JcCB0429031(+) =JcCA0263611(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9PEZ8_POPTR 182 49.3 56.2 (tr|A9PEZ8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1083784 PE=2 SV=1
Arabidopsis_pep AT3G51160.1 174 46.3 56.2 | Symbols: MUR1, MUR_1, GMD2 | MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase | chr3:19007232-19008353 REVERSE
soybean_pep Glyma01g37270.1 179 47.8 56.7  
Medicago_pep IMGA|Medtr5g021700.1 166 44.3 55.2 NAD-dependent epimerase/dehydratase; Short-chain dehydrogenase/reductase SDR; GDP-mannose 4,6-dehydratase chr05_pseudomolecule_IMGAG_V3 8340648-8338692 E EGN_Mt090430 20090702
grape_pep GSVIVT01018803001 99.0 37.7 47.1  
castor_bean_cds 28623.m000407 143 84.4 84.4 GDP mannose-4,6-dehydratase, putative
castor_bean_pep 28623.m000407 174 51.6 56.9 GDP mannose-4,6-dehydratase, putative
JAT_13201ests gi|268526257|gb|FM891513.1|FM891513 107 90.0 90.0 FM891513 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001820, mRNA sequence
KJC_r1 KJC_c03084 184 86.6 86.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0126561.10 length: 175 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 3e-07 22-69
IPR006368 GDP-mannose 4,6-dehydratase
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity    
Biological Process GO:0019673 GDP-mannose metabolic process    
HMMPanther PTHR10366:SF32 GDP 2.4e-36 26-160
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
superfamily SSF51735 NAD(P)-binding 6.7e-13 26-168
no_ID  
Gene3D G3DSA:3.90.25.10 no description 3.2e-07 105-168
HMMPanther PTHR10366 NAD 2.4e-36 26-160