| JcS_101979 | JcCB0125511(-) =JcCA0044701(-) =JcCA0284281(-) =JcCB0170771(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q9ZRJ0_TOBAC | 1103 | 64.0 | 77.7 | (tr|Q9ZRJ0) Retrotransposon Tto1 DNA OS=Nicotiana tabacum PE=4 SV=1 |
| Arabidopsis_pep | ATMG00300.1 | 72.8 | 38.0 | 47.9 | | Symbols: ORF145A | hypothetical protein | chrM:89617-90054 REVERSE |
| soybean_pep | Glyma07g34840.1 | 334 | 27.3 | 47.4 | |
| Medicago_pep | IMGA|Medtr1g140330.1 | 210 | 27.3 | 45.2 | Polynucleotidyl transferase, Ribonuclease H fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01028612001 | 335 | 32.6 | 53.1 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | gi|268518791|gb|FM889034.1|FM889034 | 674 | 94.4 | 94.4 | FM889034 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002587, mRNA sequence |
| KJC_r1 | --No_Hits-- |
| JcCB0125511.20 | length: 1031 aa. | |||
| IPR001584 | Integrase, catalytic core | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 1.1e-32 | 484-596 |
| ProfileScan | PS50994 | INTEGRASE | 25.643 | 473-643 |
| IPR001878 | Zinc finger, CCHC-type | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| ProfileScan | PS50158 | ZF_CCHC | 9.455 | 236-251 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 1.5e-42 | 474-635 |
| no_ID | ||||
| Gene3D | G3DSA:3.30.420.10 | no description | 8.8e-27 | 501-648 |
| HMMPanther | PTHR11439 | GAG-POL-RELATED | 3.3e-148 | 7-803 |
| Seg | seg | seg | NA | 747-762 |