Jatropha Genome Database

JcCB0124931.10 (JcS_100863.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0124931
Scaffold:
JcS_100863 JcCA0246001(+) =JcCB0902911(-) =JcCB0124931(+) =JcCB0429731(-) =JcCB0435691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SWP5_RICCO 537 85.9 89.5 (tr|B9SWP5) Adenylosuccinate lyase, putative OS=Ricinus communis GN=RCOM_0498660 PE=4 SV=1
Arabidopsis_pep AT1G36280.1 437 74.6 83.0 | Symbols: | adenylosuccinate lyase, putative / adenylosuccinase, putative | chr1:13640600-13642908 FORWARD
soybean_pep Glyma14g06780.1 470 74.5 84.1  
Medicago_pep IMGA|Medtr7g111520.1 466 71.9 82.6 Fumarate lyase; Adenylosuccinate lyase chr07_pseudomolecule_IMGAG_V3 26222949-26228352 E EGN_Mt090430 20090702
grape_pep GSVIVT01016375001 490 79.5 86.6  
castor_bean_cds 29610.m000406 700 91.0 91.0 adenylosuccinate lyase, putative
castor_bean_pep 29610.m000406 537 85.9 89.5 adenylosuccinate lyase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c08516 870 98.4 98.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0124931.10 length: 310 aa.
IPR000362 Fumarate lyase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR00149 FUMRATELYASE 4e-06 15-33
103-130
146-162
HMMPfam PF00206 Lyase_1 9.8e-29 23-169
IPR008948 L-Aspartase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 2.1e-61 23-297
IPR013539 Adenylosuccinate lyase C-terminal
Molecular Function GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity    
Biological Process GO:0006188 IMP biosynthetic process    
HMMPfam PF08328 ASL_C 1.1e-38 188-287
IPR020557 Fumarate lyase, conserved site
Molecular Function GO:0003824 catalytic activity    
PatternScan PS00163 FUMARATE_LYASES NA 146-155
no_ID  
Gene3D G3DSA:1.20.200.10 no description 2.3e-54 23-268
HMMPanther PTHR11444 ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE 1.6e-79 23-305
HMMPanther PTHR11444:SF2 ADENYLOSUCCINATE 1.6e-79 23-305