Jatropha Genome Database

JcCB0124611.10 (JcS_105381.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0124611
Scaffold:
JcS_105381 JcCB0689281(+) =JcCB0124611(+) =JcCA0311471(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9ZRJ0_TOBAC 231 71.0 83.2 (tr|Q9ZRJ0) Retrotransposon Tto1 DNA OS=Nicotiana tabacum PE=4 SV=1
Arabidopsis_pep AT4G23160.1 105 35.4 56.5 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma11g04990.1 137 45.3 62.8  
Medicago_pep IMGA|CU179634_24.1 114 40.4 55.5 Polynucleotidyl transferase, Ribonuclease H fold CU179634.6 87152-89450 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0124611.10 length: 209 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 3.4e-45 53-167
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 8.8e-68 1-163
Seg seg seg NA 58-73