Jatropha Genome Database

JcCB0124231.10 (JcS_101976.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0124231
Scaffold:
JcS_101976 JcCB0124231(-) =JcCB0140211(-) =JcCB0914631(+) =JcCD0114731(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5BNR5_VITVI 838 76.5 86.4 (tr|A5BNR5) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035665 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 496 51.0 67.7 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma18g38660.1 555 52.6 70.2  
Medicago_pep IMGA|Medtr4g080020.1 563 53.8 69.2 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01012382001 197 49.0 66.5  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0124231.10 length: 887 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 1.4e-89 415-657
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 2.7e-245 22-887
Seg seg seg NA 240-277
362-376
superfamily SSF56672 DNA/RNA 3.2e-33 414-846