Jatropha Genome Database

JcCB0119431.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0119431
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SAY3_RICCO 295 70.6 82.6 (tr|B9SAY3) Short chain alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_1339260 PE=3 SV=1
Arabidopsis_pep AT1G52340.1 184 49.7 63.6 | Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | ABA2 (ABA DEFICIENT 2); alcohol dehydrogenase/ oxidoreductase/ xanthoxin dehydrogenase | chr1:19489997-19491527 REVERSE
soybean_pep Glyma12g09780.1 238 59.0 72.5  
Medicago_pep IMGA|Medtr7g077280.1 186 47.3 65.7 Short-chain dehydrogenase/reductase SDR chr07_pseudomolecule_IMGAG_V3 16165455-16166827 H EGN_Mt090430 20090702
grape_pep GSVIVT01036069001 248 60.2 75.1  
castor_bean_cds 30075.m001195 85.7 82.1 82.1 short chain alcohol dehydrogenase, putative
castor_bean_pep 30075.m001195 295 70.6 82.6 short chain alcohol dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06141 56.0 85.9 85.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0119431.20 length: 199 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 8.8e-09 77-88
131-139
151-170
HMMPanther PTHR19410 SHORT-CHAIN 1.7e-81 1-197
HMMPfam PF00106 adh_short 5.9e-25 4-169
IPR002347 Glucose/ribitol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00081 GDHRDH 1.6e-26 5-22
77-88
125-141
151-170
171-188
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 5.5e-50 1-193
superfamily SSF51735 NAD(P)-binding 8.9e-49 2-192
IPR020904 Short-chain dehydrogenase/reductase, conserved site
Molecular Function GO:0016491 oxidoreductase activity    
PatternScan PS00061 ADH_SHORT NA 138-166
no_ID  
HMMPanther PTHR19410:SF80 SHORT 1.7e-81 1-197
Seg seg seg NA 137-146