Jatropha Genome Database

JcCB0119431.10  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0119431
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5BF87_VITVI 649 56.9 71.8 (tr|A5BF87) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042091 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 381 41.1 60.6 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma16g09250.1 511 48.7 64.6  
Medicago_pep IMGA|Medtr4g080020.1 442 45.2 61.8 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01012382001 179 44.4 64.1  
castor_bean_cds --No_Hits--        
castor_bean_pep 30119.m000594 49.7 22.8 41.4 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0119431.10 length: 1394 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 2.5e-94 882-1125
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 1.9e-260 7-1360
Seg seg seg NA 65-82
440-461
464-475
494-510
612-624
721-733
760-818
1382-1393
superfamily SSF56672 DNA/RNA 1.1e-42 881-1318