Jatropha Genome Database

JcCB0119211.10 (JcS_201693.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0119211
Scaffold:
JcS_201693 JcCB0119211(-) =JcCD0159493(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9ZRJ0_TOBAC 251 62.9 73.7 (tr|Q9ZRJ0) Retrotransposon Tto1 DNA OS=Nicotiana tabacum PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma06g18690.1 176 48.8 62.3  
Medicago_pep IMGA|Medtr4g080020.1 58.9 29.8 48.4 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01009548001 70.9 42.7 56.1  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests gi|268518200|gb|FM888474.1|FM888474 434 90.8 90.8 FM888474 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001895, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0119211.10 length: 501 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 7.1e-18 309-434
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 1.2e-35 315-501
Seg seg seg NA 60-73
182-193