Jatropha Genome Database

JcCB0118621.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0118621
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S9Z3_RICCO 754 65.0 78.0 (tr|B9S9Z3) (+)-delta-cadinene synthase isozyme A, putative OS=Ricinus communis GN=RCOM_0179780 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 421 40.3 60.4 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 498 45.1 64.7  
Medicago_pep IMGA|Medtr6g008950.1 528 47.2 67.8 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 624 54.5 68.6  
castor_bean_cds 28166.m001038 248 79.3 79.3 (+)-delta-cadinene synthase isozyme A, putative
castor_bean_pep 28166.m001038 754 65.0 78.0 (+)-delta-cadinene synthase isozyme A, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0118621.10 length: 550 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 9.7e-53 25-196
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.4e-91 226-497
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 8.9e-63 24-221
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.4e-130 187-548
superfamily SSF48576 Terpenoid 6.4e-129 222-549
no_ID  
Coil coil coiled-coil NA 43-64
Seg seg seg NA 177-188