Jatropha Genome Database

JcCB0116941.10 (JcS_100390.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0116941
Scaffold:
JcS_100390 JcCA0103791(-) =JcCA0275671(+) =JcCB0027171(+) =JcCB0056061(-) =JcCB0161621(-) =JcCB0116941(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl C6TKT1_SOYBN 304 98.0 98.6 (tr|C6TKT1) Ubiquitin carrier protein OS=Glycine max PE=2 SV=1
Arabidopsis_pep AT5G53300.2 293 94.6 98.6 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase | chr5:21632802-21633989 REVERSE
soybean_pep Glyma12g03670.1 306 98.6 99.3  
Medicago_pep IMGA|Medtr4g098530.1 301 95.9 99.3 Ubiquitin-conjugating enzyme, E2 chr04_pseudomolecule_IMGAG_V3 21241887-21239363 E EGN_Mt090430 20090702
grape_pep GSVIVT01024027001 303 97.3 100.0  
castor_bean_cds 29915.m000490 184 83.6 83.6 ubiquitin-conjugating enzyme E2, putative
castor_bean_pep 28049.m000299 292 93.9 98.0 ubiquitin-conjugating enzyme E2, putative
JAT_13201ests gi|268517028|gb|FM892580.1|FM892580 216 83.4 83.4 FM892580 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003173, mRNA sequence
KJC_r1 KJC_c00222 228 83.0 83.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0116941.10 length: 148 aa.
IPR000608 Ubiquitin-conjugating enzyme, E2
method AccNumber shortName E-value location
Molecular Function GO:0019787 small conjugating protein ligase activity    
Biological Process GO:0043687 post-translational protein modification    
Biological Process GO:0051246 regulation of protein metabolic process    
HMMPfam PF00179 UQ_con 1.2e-51 5-140
HMMSmart SM00212 no description 1.3e-77 4-147
PatternScan PS00183 UBIQUITIN_CONJUGAT_1 NA 74-89
ProfileScan PS50127 UBIQUITIN_CONJUGAT_2 47.208 4-136
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Gene3D G3DSA:3.10.110.10 no description 3.6e-59 1-148
superfamily SSF54495 UBC-like 5.7e-67 2-148
no_ID  
HMMPanther PTHR11621 UBIQUITIN-CONJUGATING 1.3e-105 2-145
HMMPanther PTHR11621:SF29 UBIQUITIN-CONJUGATING 1.3e-105 2-145