Jatropha Genome Database

JcCB0115061.10 (JcS_100447.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0115061
Scaffold:
JcS_100447 JcCA0296741(-) =JcCB0115061(+) =JcCB0135511(+) =JcCA0307801(-) =JcCA0110991(+) =JcCB0044721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S0H1_RICCO 153 88.9 95.1 (tr|B9S0H1) Transcription factor Dp-1, putative OS=Ricinus communis GN=RCOM_1354870 PE=3 SV=1
Arabidopsis_pep AT5G03415.1 95.5 91.1 97.8 | Symbols: DPB, ATDPB | DPB; protein binding / protein heterodimerization | chr5:842842-845200 FORWARD
soybean_pep Glyma12g02050.3 120 83.1 87.3  
Medicago_pep IMGA|Medtr4g107200.1 124 80.0 88.0 Winged helix repressor DNA-binding; chr04_pseudomolecule_IMGAG_V3 23346768-23350809 E EGN_Mt090430 20090702
grape_pep GSVIVT01025739001 124 77.5 81.2  
castor_bean_cds 30078.m002288 276 91.2 91.2 Transcription factor Dp-1, putative
castor_bean_pep 30078.m002288 153 88.9 95.1 Transcription factor Dp-1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0115061.10 length: 81 aa.
IPR014889 Transcription factor DP, C-terminal
method AccNumber shortName E-value location
HMMPfam PF08781 DP 3.8e-24 1-64
IPR015648 Transcription factor DP
HMMPanther PTHR12548 DP 1.5e-26 1-53
no_ID  
HMMPanther PTHR12548:SF1 DP 1.5e-26 1-53