Jatropha Genome Database

JcCB0114361.10 (JcS_103935.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0114361
Scaffold:
JcS_103935 JcCB0114361(+) =JcCA0304111(-) =JcCA0073501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9N4G0_POPTR 325 55.0 70.1 (tr|B9N4G0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_784748 PE=4 SV=1
Arabidopsis_pep AT4G02570.3 134 30.9 52.3 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding | chr4:1129315-1133435 FORWARD
soybean_pep Glyma09g05180.1 145 32.3 52.6  
Medicago_pep IMGA|Medtr8g139160.2 139 32.3 51.6 Cullin; Winged helix repressor DNA-binding chr08_pseudomolecule_IMGAG_V3 33872362-33880475 E EGN_Mt090430 20090702
grape_pep GSVIVT01017738001 145 33.3 51.6  
castor_bean_cds --No_Hits--        
castor_bean_pep 29726.m004021 143 32.3 51.6 Cullin-1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0114361.10 length: 340 aa.
IPR001373 Cullin, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
HMMPfam PF00888 Cullin 2e-27 66-294
IPR016159 Cullin repeat-like-containing domain
superfamily SSF74788 Cullin 1.4e-30 67-282
no_ID  
Gene3D G3DSA:1.20.1310.10 no description 2.6e-16 166-279
HMMPanther PTHR11932 CULLIN 5e-09 67-142
HMMPanther PTHR11932:SF6 CULLIN-RELATED 5e-09 67-142