Jatropha Genome Database

JcCB0113371.20 (JcS_104103.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0113371
Scaffold:
JcS_104103 JcCB0173851(+) =JcCB0113371(+) =JcCA0076141(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SVG7_RICCO 328 79.7 85.3 (tr|B9SVG7) Nuclear matrix protein, putative OS=Ricinus communis GN=RCOM_1264550 PE=4 SV=1
Arabidopsis_pep AT5G09860.1 228 63.2 72.6 | Symbols: | nuclear matrix protein-related | chr5:3066815-3070733 FORWARD
soybean_pep Glyma04g16810.1 296 74.5 82.1  
Medicago_pep IMGA|Medtr3g005340.1 213 82.4 89.1 hypothetical protein chr03_pseudomolecule_IMGAG_V3 250110-240700 E EGN_Mt090430 20090702
grape_pep GSVIVT01036631001 293 73.0 81.1  
castor_bean_cds 30040.m000265 533 86.5 86.5 nuclear matrix protein, putative
castor_bean_pep 30040.m000265 328 79.7 85.3 nuclear matrix protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09325 712 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0113371.20 length: 197 aa.
IPR021861 THO complex, subunit THOC1
method AccNumber shortName E-value location
HMMPfam PF11957 efThoc1 2.1e-07 2-55
no_ID  
HMMPanther PTHR13265 THO 3.7e-23 1-112
Seg seg seg NA 129-146