Jatropha Genome Database

JcCB0110871.10 (JcS_100035.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0110871
Scaffold:
JcS_100035 JcCB0193021(+) =JcCB0110131(-) =JcCB0588851(-) =JcCB0097241(-) =JcCA0262331(-) =JcCB0027041(-) =JcCB0068881(-) =JcCB0110871(-) =JcCB0907471(+) =JcCA0165421(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RYW0_RICCO 466 81.0 89.7 (tr|B9RYW0) Ubiquitin carboxyl-terminal hydrolase OS=Ricinus communis GN=RCOM_1314030 PE=3 SV=1
Arabidopsis_pep AT4G10590.1 326 61.5 77.1 | Symbols: UBP10 | ubiquitin carboxyl-terminal hydrolase family protein | chr4:6538919-6543272 REVERSE
soybean_pep Glyma10g31560.1 352 64.2 80.7  
Medicago_pep IMGA|Medtr7g105660.1 240 48.7 67.0 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Ubiquitin carboxyl-terminal hydrolase, N-terminal region 2 chr07_pseudomolecule_IMGAG_V3 24271300-24260562 E EGN_Mt090430 20090702
grape_pep GSVIVT01019677001 395 69.6 83.9  
castor_bean_cds 30068.m002596 650 85.5 85.5 Ubiquitin carboxyl-terminal hydrolase, putative
castor_bean_pep 30068.m002596 466 81.0 89.7 Ubiquitin carboxyl-terminal hydrolase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c10498 474 98.5 98.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0110871.10 length: 315 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 6.3e-28 179-273
ProfileScan PS50235 UCH_2_3 9.453 181-273
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 182-197
no_ID  
HMMPanther PTHR10420 UBIQUITIN 3.8e-55 1-273
HMMPanther PTHR10420:SF72 UBIQUITIN 3.8e-55 1-273
superfamily SSF54001 Cysteine 4.5e-27 175-273