Jatropha Genome Database

JcCB0109541.30  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0109541
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S6T0_RICCO 955 85.2 92.2 (tr|B9S6T0) AMP dependent ligase, putative OS=Ricinus communis GN=RCOM_0873340 PE=4 SV=1
Arabidopsis_pep AT2G17650.1 807 72.7 83.5 | Symbols: | AMP-dependent synthetase and ligase family protein | chr2:7671041-7672936 FORWARD
soybean_pep Glyma02g04790.1 840 74.4 85.9  
Medicago_pep IMGA|Medtr8g088410.1 842 74.4 86.5 AMP-dependent synthetase and ligase chr08_pseudomolecule_IMGAG_V3 18721448-18724601 E EGN_Mt090430 20090702
grape_pep GSVIVT01003829001 442 69.0 74.8  
castor_bean_cds 29830.m001428 1324 85.7 85.7 AMP dependent ligase, putative
castor_bean_pep 29830.m001428 955 85.2 92.2 AMP dependent ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01775 54.0 90.7 90.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0109541.30 length: 528 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 5.6e-90 24-453
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 171-182
no_ID  
Gene3D G3DSA:2.30.38.10 no description 8.3e-13 340-422
Gene3D G3DSA:3.30.300.30 no description 1.4e-31 423-519
Gene3D G3DSA:3.40.50.980 no description 2.6e-33 1-149
165-334
HMMPanther PTHR11968 ATP-DEPENDENT 0 1-524
HMMPanther PTHR11968:SF26 ADENOSINE 0 1-524
superfamily SSF56801 Acetyl-CoA 3.7e-140 1-524