Jatropha Genome Database

JcCB0105731.10 (JcS_101957.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0105731
Scaffold:
JcS_101957 JcCB0105731(-) =JcCB0498951(+) =JcCB0355951(-) =JcCA0143731(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SS07_RICCO 184 88.7 93.8 (tr|B9SS07) Signal recognition particle 19 kD protein, putative OS=Ricinus communis GN=RCOM_0519610 PE=4 SV=1
Arabidopsis_pep AT1G48160.1 146 76.4 83.1 | Symbols: | signal recognition particle 19 kDa protein, putative / SRP19, putative | chr1:17786779-17788286 REVERSE
soybean_pep Glyma16g26150.1 163 77.3 87.6  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01017663001 177 84.5 91.8  
castor_bean_cds 29628.m000763 303 86.9 86.9 signal recognition particle 19 kD protein, putative
castor_bean_pep 29628.m000763 184 88.7 93.8 signal recognition particle 19 kD protein, putative
JAT_13201ests gi|268517933|gb|FM893308.1|FM893308 113 94.5 94.5 FM893308 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004108, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0105731.10 length: 113 aa.
IPR002778 Signal recognition particle, SRP19 subunit
method AccNumber shortName E-value location
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane    
Molecular Function GO:0008312 7S RNA binding    
Cellular Component GO:0048500 signal recognition particle    
HMMPanther PTHR17453 SIGNAL 1.7e-29 1-103
HMMPfam PF01922 SRP19 2.8e-21 1-85
superfamily SSF69695 SRP19 1.5e-23 1-88
no_ID  
Seg seg seg NA 98-112