Jatropha Genome Database

JcCB0103991.10 (JcS_100129.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0103991
Scaffold:
JcS_100129 JcCA0301881(+) =JcCB0062531(-) =JcCA0150751(+) =JcCB0228191(-) =JcCA0221281(-) =JcCB0229861(-) =JcCB0103991(+) =JcCA0015901(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5AE25_VITVI 128 31.1 50.1 (tr|A5AE25) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028369 PE=4 SV=1
Arabidopsis_pep AT4G35733.1 83.6 26.3 45.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box protein-related / C-type lectin-related (TAIR:AT1G44080.1); Has 92 Blast hits to 87 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:16934426-16935502 FORWARD
soybean_pep Glyma02g04930.1 128 31.8 47.2  
Medicago_pep IMGA|Medtr8g088900.1 126 31.0 48.4 Cyclin-like F-box chr08_pseudomolecule_IMGAG_V3 18979893-18969554 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 29830.m001399 101 28.8 43.6 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0103991.10 length: 369 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMSmart SM00256 no description 0.0018 30-71
IPR005174 Protein of unknown function DUF295
HMMPfam PF03478 DUF295 2.4e-06 297-346