Jatropha Genome Database

JcCB0103641.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0103641
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RLK4_RICCO 124 61.7 72.0 (tr|B9RLK4) Mads box protein, putative OS=Ricinus communis GN=RCOM_1468080 PE=3 SV=1
Arabidopsis_pep AT5G60910.1 98.6 55.6 64.6 | Symbols: AGL8, FUL | AGL8 (agamous-like 8); transcription factor | chr5:24502736-24506013 REVERSE
soybean_pep Glyma06g22650.1 96.7 73.8 86.2  
Medicago_pep IMGA|Medtr8g077590.1 91.7 69.2 86.2 Transcription factor, MADS-box; Transcription factor, K-box chr08_pseudomolecule_IMGAG_V3 15487044-15481223 E EGN_Mt090430 20090702
grape_pep GSVIVT01012250001 113 55.7 68.9  
castor_bean_cds 30138.m003939 244 86.0 86.0 mads box protein, putative
castor_bean_pep 30138.m003939 124 61.7 72.0 mads box protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0103641.10 length: 165 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 2.6e-23 23-93
ProfileScan PS51297 K_BOX 13.482 7-97
no_ID  
Coil coil coiled-coil NA 44-111
HMMPanther PTHR11945 MADS 1.5e-19 24-124
HMMPanther PTHR11945:SF19 MADS 1.5e-19 24-124
Seg seg seg NA 88-97
100-110
131-139