Jatropha Genome Database

JcCB0103411.10 (JcS_100189.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0103411
Scaffold:
JcS_100189 JcCB0008321(-) =JcCB0587971(-) =JcCB0684951(+) =JcCB0103411(-) =JcCB0004801(-) =JcCB0123281(+) =JcCB0182741(-) =JcCA0070561(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RH05_RICCO 644 94.7 97.5 (tr|B9RH05) Serine palmitoyltransferase, putative OS=Ricinus communis GN=RCOM_1445700 PE=3 SV=1
Arabidopsis_pep AT5G23670.2 602 85.8 93.8 | Symbols: LCB2 | LCB2; protein binding / serine C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
soybean_pep Glyma02g07250.1 631 91.6 96.3  
Medicago_pep IMGA|Medtr5g080310.1 116 31.4 50.2 Aminotransferase, class I and II; chr05_pseudomolecule_IMGAG_V3 30042155-30035289 F EGN_Mt090430 20090702
grape_pep GSVIVT01033008001 617 89.5 95.0  
castor_bean_cds 30131.m006861 1251 91.2 91.2 serine palmitoyltransferase, putative
castor_bean_pep 30131.m006861 644 94.7 97.5 serine palmitoyltransferase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04354 1245 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0103411.10 length: 323 aa.
IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016740 transferase activity    
PatternScan PS00599 AA_TRANSFER_CLASS_2 NA 308-317
IPR004839 Aminotransferase, class I/II
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 2.1e-38 101-322
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 3.9e-66 117-323
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 8.2e-63 76-323
no_ID  
HMMPanther PTHR13693 CLASS 1e-191 4-323
HMMPanther PTHR13693:SF3 SERINE 1e-191 4-323