Jatropha Genome Database

JcCB0102421.10 (JcS_100106.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0102421
Scaffold:
JcS_100106 JcCD0118264(-) =JcCB0444931(-) =JcCB0370211(-) =JcPR03EEYGU(+) =JcCD0063834(-) =JcCD0062083(-) =JcCB0102421(+) =JcCB0365891(-) =JcCB0472031(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RDM8_RICCO 249 71.6 82.1 (tr|B9RDM8) Dtdp-4-dehydrorhamnose dehydrogenase, putative OS=Ricinus communis GN=RCOM_1614500 PE=4 SV=1
Arabidopsis_pep AT4G00560.1 213 63.9 74.6 | Symbols: | methionine adenosyltransferase regulatory beta subunit-related | chr4:240798-242267 REVERSE
soybean_pep Glyma07g08160.1 202 63.4 70.7  
Medicago_pep IMGA|Medtr8g034380.1 202 63.5 73.6 dTDP-4-dehydrorhamnose reductase chr08_pseudomolecule_IMGAG_V3 7402473-7406084 E EGN_Mt090430 20090702
grape_pep GSVIVT01026821001 239 72.3 81.1  
castor_bean_cds 30174.m008986 309 83.1 83.1 dtdp-4-dehydrorhamnose dehydrogenase, putative
castor_bean_pep 30174.m008986 249 71.6 82.1 dtdp-4-dehydrorhamnose dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0102421.10 length: 162 aa.
IPR005913 dTDP-4-dehydrorhamnose reductase
method AccNumber shortName E-value location
Molecular Function GO:0008831 dTDP-4-dehydrorhamnose reductase activity    
Biological Process GO:0045226 extracellular polysaccharide biosynthetic process    
HMMPfam PF04321 RmlD_sub_bind 1.6e-22 6-162
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 1.1e-24 6-162
superfamily SSF51735 NAD(P)-binding 4.2e-26 6-162
no_ID  
HMMPanther PTHR10491 DTDP-DEHYDRORHAMNOSE 5.8e-31 6-162
Seg seg seg NA 40-53