Jatropha Genome Database

JcCB0101331.10 (JcS_100099.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0101331
Scaffold:
JcS_100099 JcCB0837721(+) =JcCB0279501(+) =JcCB0172651(-) =JcCB0454891(-) =JcCB0101331(-) =JcCB0003261(-) =JcCB0359161(-) =JcCB0286011(-) =JcCB0143411(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SUG8_RICCO 126 66.7 78.5 (tr|B9SUG8) Cell cycle checkpoint protein rad17, putative OS=Ricinus communis GN=RCOM_0572460 PE=4 SV=1
Arabidopsis_pep AT5G66130.1 95.9 50.5 68.8 | Symbols: ATRAD17, RAD17 | ATRAD17 (ARABIDOPSIS THALIANA RADIATION SENSITIVE) | chr5:26434236-26437091 FORWARD
soybean_pep Glyma16g23360.1 100 58.5 73.4  
Medicago_pep IMGA|Medtr8g089430.2 103 53.0 69.0 Checkpoint protein Rad24 chr08_pseudomolecule_IMGAG_V3 19216485-19221333 E EGN_Mt090430 20090702
grape_pep GSVIVT01018736001 100 57.0 73.1  
castor_bean_cds 29656.m000472 161 87.0 87.0 cell cycle checkpoint protein rad17, putative
castor_bean_pep 29656.m000472 126 66.7 78.5 cell cycle checkpoint protein rad17, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0101331.10 length: 103 aa.
IPR004582 Checkpoint protein Rad24
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006281 DNA repair    
Biological Process GO:0007049 cell cycle    
HMMPanther PTHR12172 CELL 3.4e-20 27-92
no_ID  
HMMPfam PF03215 Rad17 1e-13 35-92
superfamily SSF52540 P-loop 1.3e-06 34-91