Jatropha Genome Database

JcCB0097901.30 (JcS_100116.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0097901
Scaffold:
JcS_100116 JcCA0113611(-) =JcCB0402371(-) =JcCB0097901(+) =JcCA0125231(+) =JcCA0316451(+) =JcCB0112461(-) =JcCB0120561(+) =JcCB0643441(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RZD1_RICCO 246 78.1 89.4 (tr|B9RZD1) Multidrug resistance pump, putative OS=Ricinus communis GN=RCOM_0938290 PE=4 SV=1
Arabidopsis_pep AT1G47530.1 152 54.8 72.6 | Symbols: | ripening-responsive protein, putative | chr1:17451724-17454110 FORWARD
soybean_pep Glyma20g30140.1 155 53.5 75.2  
Medicago_pep IMGA|Medtr1g025870.1 153 56.6 73.6 Multi antimicrobial extrusion protein MatE chr01_pseudomolecule_IMGAG_V3 6491484-6485861 E EGN_Mt090430 20090702
grape_pep GSVIVT01009629001 151 52.1 68.1  
castor_bean_cds 29851.m002453 327 86.7 86.7 multidrug resistance pump, putative
castor_bean_pep 29851.m002453 246 78.1 89.4 multidrug resistance pump, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0097901.30 length: 148 aa.
IPR002528 Multi antimicrobial extrusion protein MatE
method AccNumber shortName E-value location
Biological Process GO:0006855 multidrug transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPanther PTHR11206 MULTIDRUG 1.2e-52 56-148
HMMPfam PF01554 MatE 2.4e-21 42-147
no_ID  
HMMPanther PTHR11206:SF9 MULTIDRUG 1.2e-52 56-148