Jatropha Genome Database

JcCB0097621.30 (JcS_200198.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0097621
Scaffold:
JcS_200198 JcPR03DNOL0(+) =JcCB0097621(+) =JcPR04IEHPL(+) =JcCA0019181(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9IM15_POPTR 491 87.3 91.8 (tr|B9IM15) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1106810 PE=4 SV=1
Arabidopsis_pep AT4G25810.1 440 78.4 87.1 | Symbols: XTR6, XTH23 | XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | chr4:13128694-13129715 FORWARD
soybean_pep Glyma13g01140.1 475 85.9 91.6  
Medicago_pep IMGA|Medtr8g128680.1 484 86.4 93.2 Concanavalin A-like lectin/glucanase; Xyloglucan endo-transglycosylase, C-terminal chr08_pseudomolecule_IMGAG_V3 30158438-30157091 E EGN_Mt090430 20090702
grape_pep GSVIVT01029162001 415 78.8 81.5  
castor_bean_cds 30179.m000573 597 84.8 84.8 Xyloglucan endotransglucosylase/hydrolase protein 22 precursor, putative
castor_bean_pep 30179.m000574 490 90.9 94.3 conserved hypothetical protein
JAT_13201ests gi|237680585|gb|GO246736.1|GO246736 609 96.2 96.2 JcrME_RL0280 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c10868 149 80.2 80.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0097621.30 length: 286 aa.
IPR000757 Glycoside hydrolase, family 16
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00722 Glyco_hydro_16 1e-62 28-207
IPR008263 Glycoside hydrolase, family 16, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01034 GLYCOSYL_HYDROL_F16 NA 101-111
IPR008985 Concanavalin A-like lectin/glucanase
superfamily SSF49899 Concanavalin 5.5e-110 22-286
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
Cellular Component GO:0005618 cell wall    
Biological Process GO:0006073 cellular glucan metabolic process    
Molecular Function GO:0016762 xyloglucan:xyloglucosyl transferase activity    
Cellular Component GO:0048046 apoplast    
HMMPfam PF06955 XET_C 3.2e-23 232-283
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 3.1e-115 11-283
IPR016455 Xyloglucan endotransglucosylase/hydrolase
HMMPIR PIRSF005604 Xyloglucan 3.2e-174 1-286
no_ID  
Seg seg seg NA 4-20