Jatropha Genome Database

JcCB0097241.20 (JcS_100035.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0097241
Scaffold:
JcS_100035 JcCB0193021(+) =JcCB0110131(-) =JcCB0588851(-) =JcCB0097241(-) =JcCA0262331(-) =JcCB0027041(-) =JcCB0068881(-) =JcCB0110871(-) =JcCB0907471(+) =JcCA0165421(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RYW5_RICCO 706 79.6 87.0 (tr|B9RYW5) Phosphatidylcholine transfer protein, putative OS=Ricinus communis GN=RCOM_1314180 PE=4 SV=1
Arabidopsis_pep AT1G64720.1 540 65.4 75.7 | Symbols: CP5 | CP5 | chr1:24046887-24048537 REVERSE
soybean_pep Glyma06g14120.1 550 60.6 73.2  
Medicago_pep IMGA|Medtr3g122780.1 522 61.5 76.3 Lipid-binding START chr03_pseudomolecule_IMGAG_V3 30625124-30628744 E EGN_Mt090430 20090702
grape_pep GSVIVT01019684001 600 80.3 86.7  
castor_bean_cds 30068.m002601 918 86.2 86.2 phosphatidylcholine transfer protein, putative
castor_bean_pep 30068.m002601 706 79.6 87.0 phosphatidylcholine transfer protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00097 2625 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0097241.20 length: 441 aa.
IPR002913 Lipid-binding START
method AccNumber shortName E-value location
ProfileScan PS50848 START 20.732 158-349
no_ID  
Gene3D G3DSA:3.30.530.20 no description 6.4e-59 131-351
HMMPanther PTHR19308 PHOSPHATIDYLCHOLINE 3.9e-93 13-441
Seg seg seg NA 114-128
superfamily SSF55961 Bet 4.4e-48 138-347