Jatropha Genome Database

JcCB0096461.10 (JcS_105740.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0096461
Scaffold:
JcS_105740 JcCB0979461(-) =JcCB0096461(+) =JcCA0032471(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RYH3_RICCO 315 57.0 62.3 (tr|B9RYH3) DNA binding protein, putative OS=Ricinus communis GN=RCOM_0813280 PE=3 SV=1
Arabidopsis_pep AT4G34000.2 148 46.8 59.5 | Symbols: ABF3, DPBF5 | ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor | chr4:16296008-16297971 FORWARD
soybean_pep Glyma02g14880.2 137 48.1 56.6  
Medicago_pep IMGA|Medtr3g147720.1 150 48.7 59.2 bZIP transcription factor, bZIP_1 chr03_pseudomolecule_IMGAG_V3 38313295-38308510 E EGN_Mt090430 20090702
grape_pep GSVIVT01009485001 132 51.0 59.5  
castor_bean_cds 29801.m003176 317 85.2 85.2 DNA binding protein, putative
castor_bean_pep 29801.m003176 315 57.0 62.3 DNA binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06820 75.8 86.0 86.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0096461.10 length: 342 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00338 no description 1e-09 270-336
PatternScan PS00036 BZIP_BASIC NA 277-292
ProfileScan PS50217 BZIP 10.392 272-317
IPR011616 bZIP transcription factor, bZIP-1
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF00170 bZIP_1 4.4e-11 274-316
no_ID  
Coil coil coiled-coil NA 293-318
HMMPanther PTHR22952 CAMP-RESPONSE 1.8e-07 265-315
HMMPanther PTHR22952:SF9 CAMP-RESPONSE 1.8e-07 265-315
Seg seg seg NA 3-11
57-73
117-166
298-309