Jatropha Genome Database

JcCB0094931.10 (JcS_100240.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0094931
Scaffold:
JcS_100240 JcCA0313461(-) =JcPR10GCESU(+) =JcCA0140901(+) =JcCB0094931(-) =JcCB0693301(+) =JcPR03C8ZD8(+) =JcCB0590851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9MV44_POPTR 246 87.4 88.9 (tr|B9MV44) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826719 PE=4 SV=1
Arabidopsis_pep AT5G47080.1 234 81.5 86.7 | Symbols: CKB1 | CKB1; protein kinase regulator | chr5:19124969-19126397 REVERSE
soybean_pep Glyma11g04180.1 236 82.2 86.7  
Medicago_pep IMGA|Medtr5g013750.1 231 80.0 85.9 Casein kinase II, regulatory subunit chr05_pseudomolecule_IMGAG_V3 4206290-4210104 E EGN_Mt090430 20090702
grape_pep GSVIVT01018326001 244 86.7 89.6  
castor_bean_cds 29709.m001188 311 91.8 91.8 casein kinase II beta chain, putative
castor_bean_pep 29709.m001188 171 95.1 97.6 casein kinase II beta chain, putative
JAT_13201ests gi|268523170|gb|FM893936.1|FM893936 456 99.2 99.2 FM893936 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004884, mRNA sequence
KJC_r1 KJC_c06118 458 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0094931.10 length: 140 aa.
IPR000704 Casein kinase II, regulatory subunit
method AccNumber shortName E-value location
Cellular Component GO:0005956 protein kinase CK2 complex    
Molecular Function GO:0019887 protein kinase regulator activity    
FPrintScan PR00472 CASNKINASEII 7.8e-28 38-59
63-84
85-106
HMMPanther PTHR11740 CASEIN 1.4e-67 18-139
HMMPfam PF01214 CK_II_beta 1.2e-41 21-136
superfamily SSF57798 Casein 1.2e-45 18-139
IPR016149 Casein kinase II, regulatory subunit, alpha-helical
Cellular Component GO:0005956 protein kinase CK2 complex    
Molecular Function GO:0019887 protein kinase regulator activity    
Gene3D G3DSA:1.10.1820.10 no description 8.1e-10 22-60
IPR016150 Casein kinase II, regulatory subunit, beta-sheet
Cellular Component GO:0005956 protein kinase CK2 complex    
Molecular Function GO:0019887 protein kinase regulator activity    
Gene3D G3DSA:2.20.25.20 no description 1.6e-20 61-125