Jatropha Genome Database

JcCB0091031.10 (JcS_100026.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0091031
Scaffold:
JcS_100026 JcCA0282791(+) =JcCB0431061(-) =JcCB0091031(-) =JcCA0154091(-) =JcCA0271431(+) =JcCA0131921(+) =JcCB0393011(+) =JcCB0108421(+) =JcPR03C347T(+) =JcCB0371181(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S4E6_RICCO 310 85.6 91.1 (tr|B9S4E6) Transcription factor RF2b, putative OS=Ricinus communis GN=RCOM_0689740 PE=3 SV=1
Arabidopsis_pep AT2G40620.1 197 62.7 68.9 | Symbols: | bZIP transcription factor family protein | chr2:16954804-16956872 REVERSE
soybean_pep Glyma14g38460.1 237 70.6 80.0  
Medicago_pep IMGA|Medtr5g083200.1 222 66.1 79.8 Basic leucine zipper chr05_pseudomolecule_IMGAG_V3 31545161-31541460 E EGN_Mt090430 20090702
grape_pep GSVIVT01024562001 242 72.5 81.9  
castor_bean_cds 29729.m002363 628 88.4 88.4 Transcription factor RF2b, putative
castor_bean_pep 29729.m002363 310 85.6 91.1 Transcription factor RF2b, putative
JAT_13201ests gi|262090975|gb|GT229333.1|GT229333 640 99.7 99.7 JC898 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL22SE.C01.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0091031.10 length: 215 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00338 no description 5e-08 19-75
ProfileScan PS50217 BZIP 9.347 19-76
IPR011616 bZIP transcription factor, bZIP-1
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF00170 bZIP_1 3.7e-07 20-63
no_ID  
Coil coil coiled-coil NA 31-59
79-111
Seg seg seg NA 13-21
202-215