Jatropha Genome Database

JcCB0090461.10 (JcS_105845.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0090461
Scaffold:
JcS_105845 JcCD0127804(-) =JcCB0090461(-) =JcCB0349891(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RGV9_RICCO 748 77.9 85.4 (tr|B9RGV9) Cystathionine beta-lyase, putative OS=Ricinus communis GN=RCOM_1444740 PE=3 SV=1
Arabidopsis_pep AT3G57050.1 648 74.7 85.8 | Symbols: CBL | CBL (cystathionine beta-lyase); cystathionine beta-lyase | chr3:21111939-21114521 REVERSE
soybean_pep Glyma03g28530.1 658 72.9 83.9  
Medicago_pep IMGA|Medtr7g010560.1 201 32.8 52.8 Cystathionine beta-lyase, related chr07_pseudomolecule_IMGAG_V3 2308691-2313997 F EGN_Mt090430 20090702
grape_pep GSVIVT01033607001 677 77.9 87.5  
castor_bean_cds 30131.m006960 1015 85.7 85.7 cystathionine beta-lyase, putative
castor_bean_pep 30131.m006960 748 77.9 85.4 cystathionine beta-lyase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0090461.10 length: 465 aa.
IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPIR PIRSF001434 Cystathionine 2.9e-167 88-464
HMMPanther PTHR11808 TRANS-SULFURATION 1.7e-191 166-463
HMMPfam PF01053 Cys_Met_Meta_PP 3.8e-138 90-460
PatternScan PS00868 CYS_MET_METAB_PP NA 271-285
IPR006238 Cystathionine beta-lyase, eukaryotic
HMMTigr TIGR01329 cysta_beta_ly_E: 1.2e-260 88-465
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.7e-73 84-329
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 4.1e-40 330-460
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 2.4e-117 77-461
no_ID  
HMMPanther PTHR11808:SF18 CYSTATHIONINE 1.7e-191 166-463
Seg seg seg NA 142-153