Jatropha Genome Database

JcCB0089711.10 (JcS_103661.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0089711
Scaffold:
JcS_103661 JcCA0068741(+) =JcCB0089711(-) =JcCB0287851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D6BQN8_9ROSI 110 82.6 82.6 (tr|D6BQN8) Protein transport protein SEC61 subunit gamma OS=Jatropha curcas PE=4 SV=1
Arabidopsis_pep AT5G50460.1 100 72.5 79.7 | Symbols: | protein transport protein SEC61 gamma subunit, putative | chr5:20552168-20552509 REVERSE
soybean_pep Glyma14g05800.2 104 76.8 79.7  
Medicago_pep IMGA|Medtr5g091490.1 106 76.8 79.7 Protein secE/sec61-gamma protein chr05_pseudomolecule_IMGAG_V3 35803902-35800018 E EGN_Mt090430 20090702
grape_pep GSVIVT01033084001 106 77.9 82.4  
castor_bean_cds 30147.m014494 278 92.2 92.2 sec61 gamma subunit, putative
castor_bean_pep 30147.m014494 107 78.3 81.2 sec61 gamma subunit, putative
JAT_13201ests gi|237681013|gb|GO247649.1|GO247649 416 100.0 100.0 JcrME_RL1193 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0089711.10 length: 69 aa.
IPR001901 Protein secE/sec61-gamma protein
method AccNumber shortName E-value location
Biological Process GO:0006605 protein targeting    
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0016020 membrane    
HMMPfam PF00584 SecE 9.8e-14 11-66
PatternScan PS01067 SECE_SEC61G NA 14-42
IPR008158 Protein translocase SEC61 complex gamma subunit
Biological Process GO:0015031 protein transport    
Molecular Function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity    
Cellular Component GO:0016020 membrane    
HMMTigr TIGR00327 secE_euk_arch: 9.2e-14 6-66
superfamily SSF103456 Preprotein 4.6e-12 2-66
no_ID  
HMMPanther PTHR12309 SEC61 3.3e-38 8-68
Seg seg seg NA 43-54