Jatropha Genome Database

JcCB0085061.10 (JcS_100130.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0085061
Scaffold:
JcS_100130 JcCA0310961(+) =JcCB0085061(-) =JcCB0235721(+) =JcCA0251661(+) =JcCB0394911(+) =JcCB0174221(+) =JcCA0305451(+) =JcCB0109281(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9ST75_RICCO 300 80.9 89.6 (tr|B9ST75) (S)-2-hydroxy-acid oxidase, putative OS=Ricinus communis GN=RCOM_0684810 PE=4 SV=1
Arabidopsis_pep AT3G14130.1 271 71.6 84.2 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4685844-4687852 REVERSE
soybean_pep Glyma08g10290.1 223 62.1 74.0  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01016712001 282 75.4 86.3  
castor_bean_cds 29727.m000487 285 84.5 84.5 (S)-2-hydroxy-acid oxidase, putative
castor_bean_pep 29727.m000487 300 80.9 89.6 (S)-2-hydroxy-acid oxidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04863 264 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0085061.10 length: 183 aa.
IPR000262 FMN-dependent dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF01070 FMN_dh 2.8e-67 5-173
IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00557 FMN_HYDROXY_ACID_DH_1 NA 70-76
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
ProfileScan PS51349 FMN_HYDROXY_ACID_DH_2 55.717 1-177
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 1.7e-59 6-175
no_ID  
HMMPanther PTHR10578 (S)-2-HYDROXY-ACID 1.6e-95 4-183
HMMPanther PTHR10578:SF9 (S)-2-HYDROXY-ACID 1.6e-95 4-183
superfamily SSF51395 FMN-linked 5.4e-53 13-175