Jatropha Genome Database

JcCB0083701.10 (JcS_200855.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0083701
Scaffold:
JcS_200855 JcCB0594321(+) =JcCB0083701(+) =JcCA0045571(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl C6T2H2_SOYBN 312 90.9 98.8 (tr|C6T2H2) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
Arabidopsis_pep AT3G02560.2 292 84.1 94.5 | Symbols: | 40S ribosomal protein S7 (RPS7B) | chr3:542341-543168 FORWARD
soybean_pep Glyma13g07650.1 312 90.9 98.8  
Medicago_pep IMGA|Medtr6g022820.1 298 86.6 95.7 Ribosomal protein S7E chr06_pseudomolecule_IMGAG_V3 5181113-5184402 E EGN_Mt090430 20090702
grape_pep GSVIVT01031018001 308 90.2 97.6  
castor_bean_cds 29980.m000174 549 88.3 88.3 40S ribosomal protein S7, putative
castor_bean_pep 29980.m000174 308 92.1 96.3 40S ribosomal protein S7, putative
JAT_13201ests gi|268523081|gb|FM896524.1|FM896524 973 99.8 99.8 FM896524 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003757, mRNA sequence
KJC_r1 KJC_c00375 1063 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0083701.10 length: 181 aa.
IPR000554 Ribosomal protein S7e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR11278 40S 3.8e-100 17-181
HMMPfam PF01251 Ribosomal_S7e 3.5e-76 10-180
PatternScan PS00948 RIBOSOMAL_S7E NA 69-82
no_ID  
Seg seg seg NA 4-17